Nucleotide Sequence and Phylogenetic Analysis of Coat Protein Gene of Two Iranian Watermelon Mosaic Virus Isolates

Document Type : Research Paper

Authors

1 Professor, Department of Plant Protection, Faculty of Agriculture, Shahid Bahonar University of Kerman.

2 Former MSc Student, Department of Plant Protection Faculty of Agriculture, Shahid Bahonar University of Kerman.

3 Instractor, Department of Plant Protection, Faculty of Agriculture, University of Jiroft.

4 Associate Professor of Plant Pathology, Faculty of Agriculture, Shahid Bahonar University of Kerman.

5 Associate Professor of Plant Pathology, Faculty of Agriculture, Shahid Bahonar University of Kerman


سمیعی ا، 1383. شناسائی، تعیین پراکنش و بررسی برخی خصوصیات ویروس‌های آلوده کننده کدوئیان در گلخانه‌های ایران. پایان نامه کارشناسی ارشد، دانشکده کشاورزی دانشگاه شهید باهنر کرمان.
ابراهیم نسبت ف، 1351. گزارشی درباره جدا کردن ویروس موزائیک هندوانه در ایران. مجله بیماری­های گیاهی. جلد هشتم، صفحه­های 17تا20.
Abou-Jawadah Y, Sobh H, EL-Zammar S, Fayyad A, and Lecoq H, 2000. Incidence and management of virus disease of Cucurbits in Lebanon. Crop Protection 19: 217-224 .
Clark MF and Adams SA N, 1977. Characteristics of microplates method of enzyme-linked-immunosorbent assay for detection of plant viruses. Journal of General Virology 34: 475-483.
Hall TA, 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.
Lecoq H, Desbiez C and Delecolle B, 2008. Cytological and molecular evidence that the whitefly-transmitted Watermelon mosaic virus and Papaya ring spot virus is a tentative member of the family Potyviridae. Journal of General Virology 81: 2289-2293.
Massumi H, Samei A, Hosseini-Pour A, Shabanian M and Rahimian H, 2007. Occurrence, distribution and relative incidence of seven virus infecting greenhouse- grown cucurbits in Iran. Plant Disease 91: 159-163.
Moreno IM, Malpica JM, Diaz-Pendon JA, Moriones E, Fraile A and Garcia-Arenal F, 2004.Variability and genomic structure of the population of Watermelon mosaic virus infecting melon in Spain. Virology 318: 451-460.
Muhire BM, Varsani A and Martin DP, 2014. SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation’,PLoS One, 9: e108277.
Nagel H and Hiebert F, 1985. Structure of Watermelon mosaic virus 1. Virology 68: 1006.
Purcifull DE, Heibert E and Edwarson J,1984. Watermelon mosaic virus-2. Description of Plant Virus 63: 1-11.
Rahimian H and Izadpanah K, 1987. Identity and prevalence of mosaic inducing cucurbit viruses in Shiraz, Iran. Journal of Phytopathologische Zeitschrift 92: 305-312.
Rozas J, Snchez-DelBarrio JC, Messeguer X and Rozas R, 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics.19: 2496-2497.
Shoeibi S, Masumi M, Nasrollahnezhad S, Heydari S, Izadpanah K and Ahmadikhah A, 2009. Sequencing of six Iranian isolates of Watermelon mosaic virus and phylogenetic comparison of Iranian isolates with other isolates of the world. Journal of Plant Pathology 45: 34-37.
Sharifi M, Massumi H, Heydarnejad J, Hosseinipour A, Shabanian M and Rahimian H, 2008. Analysis of the biological and molecular variability of Watermelon mosaic virus isolates from Iran. Virus Genes 37: 317-330.
Tamura K, Peterson D, Peterson N, Stecher G, Nei M and Kumar S, 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28: 2731-2739.
Van Regenmortel MH, 1960. Zone electrophoresis and electron microscopy of a Watermelon mosaic virus from South Africa. Virology 12: 27-130.
Zhang JX and Yangfeng WU, 2009. Complete nucleotide sequence of Watermelon mosaic virus China isolate. Virology 13: 42-50.
Zitter TA, Hopkins DL and Thomas C E, 1996. Compendium of cucurbit disease. APS Press, New York, 87pp.